Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx6-2D3Z4R4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-2D3Z4R4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-2D3Z4R4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Nkx6-2D3Z4R4 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.02■□□□□ 0.31
Nkx6-2D3Z4R4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-2D3Z4R4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-2D3Z4R4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-2D3Z4R4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-2D3Z4R4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-2D3Z4R4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-2D3Z4R4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nkx6-2D3Z4R4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-2D3Z4R4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-2D3Z4R4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-2D3Z4R4 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.98■□□□□ 0.31
Nkx6-2D3Z4R4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-2D3Z4R4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx6-2D3Z4R4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx6-2D3Z4R4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx6-2D3Z4R4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx6-2D3Z4R4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx6-2D3Z4R4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Nkx6-2D3Z4R4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Nkx6-2D3Z4R4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms