Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Rps24-207ENSMUST00000224568 714 ntBASIC17.48■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv9-3A0A0B4J1J5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.46■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gm9959-201ENSMUST00000068277 390 ntBASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv9-3A0A0B4J1J5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.43■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Etf1-202ENSMUST00000180351 108 ntBASIC17.43■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gm14117-201ENSMUST00000122417 843 ntBASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gm10399-202ENSMUST00000202768 748 ntBASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ighv9-3A0A0B4J1J5 Gm45102-201ENSMUST00000207427 857 ntBASIC17.41■□□□□ 0.38
Ighv9-3A0A0B4J1J5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms