Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv4-50A0A0B4J1J0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Igkv4-50A0A0B4J1J0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.69■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv4-50A0A0B4J1J0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.66■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Igkv4-50A0A0B4J1J0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm45444-201ENSMUST00000211394 898 ntBASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.6■□□□□ 0.41
Igkv4-50A0A0B4J1J0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms