Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv5A0A0B4J1G9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Golph3-202ENSMUST00000226517 2359 ntBASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trbv5A0A0B4J1G9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv5A0A0B4J1G9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv5A0A0B4J1G9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv5A0A0B4J1G9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv5A0A0B4J1G9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv5A0A0B4J1G9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv5A0A0B4J1G9 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.84■□□□□ 0.29
Trbv5A0A0B4J1G9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv5A0A0B4J1G9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv5A0A0B4J1G9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv5A0A0B4J1G9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv5A0A0B4J1G9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.83■□□□□ 0.28
Trbv5A0A0B4J1G9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv5A0A0B4J1G9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Gm9812-201ENSMUST00000061934 968 ntBASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv5A0A0B4J1G9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Gm4799-201ENSMUST00000095396 657 ntBASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv5A0A0B4J1G9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv5A0A0B4J1G9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trbv5A0A0B4J1G9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv5A0A0B4J1G9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.78■□□□□ 0.28
Trbv5A0A0B4J1G9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv5A0A0B4J1G9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv5A0A0B4J1G9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv5A0A0B4J1G9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv5A0A0B4J1G9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms