Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1bA0A0A6YXN8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.44■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Gm14117-201ENSMUST00000122417 843 ntBASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sirpb1bA0A0A6YXN8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.39■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sirpb1bA0A0A6YXN8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms