Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8n-2A0A075B633 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav8n-2A0A075B633 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8n-2A0A075B633 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav8n-2A0A075B633 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav8n-2A0A075B633 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8n-2A0A075B633 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8n-2A0A075B633 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav8n-2A0A075B633 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav8n-2A0A075B633 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav8n-2A0A075B633 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav8n-2A0A075B633 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav8n-2A0A075B633 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Gm8495-201ENSMUST00000188740 694 ntBASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav8n-2A0A075B633 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.37■□□□□ 0.69
Trav8n-2A0A075B633 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8n-2A0A075B633 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trav8n-2A0A075B633 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav8n-2A0A075B633 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8n-2A0A075B633 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav8n-2A0A075B633 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Trav8n-2A0A075B633 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.36■□□□□ 0.69
Trav8n-2A0A075B633 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8n-2A0A075B633 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav8n-2A0A075B633 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav8n-2A0A075B633 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8n-2A0A075B633 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav8n-2A0A075B633 Gm43137-201ENSMUST00000198052 594 ntBASIC19.34■□□□□ 0.69
Trav8n-2A0A075B633 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.34■□□□□ 0.69
Trav8n-2A0A075B633 Gm6139-201ENSMUST00000079261 882 ntBASIC19.34■□□□□ 0.69
Trav8n-2A0A075B633 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav8n-2A0A075B633 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav8n-2A0A075B633 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Gm18284-201ENSMUST00000172604 624 ntBASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav8n-2A0A075B633 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav8n-2A0A075B633 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav8n-2A0A075B633 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8n-2A0A075B633 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Trav8n-2A0A075B633 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8n-2A0A075B633 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8n-2A0A075B633 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav8n-2A0A075B633 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav8n-2A0A075B633 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.29■□□□□ 0.68
Trav8n-2A0A075B633 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.29■□□□□ 0.68
Trav8n-2A0A075B633 Mir7075-201ENSMUST00000184187 82 ntBASIC19.29■□□□□ 0.68
Trav8n-2A0A075B633 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav8n-2A0A075B633 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav8n-2A0A075B633 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms