Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cldn9Q9Z0S7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cldn9Q9Z0S7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Cldn9Q9Z0S7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn9Q9Z0S7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn9Q9Z0S7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn9Q9Z0S7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.4■□□□□ 0.86
Cldn9Q9Z0S7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn9Q9Z0S7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn9Q9Z0S7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn9Q9Z0S7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn9Q9Z0S7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn9Q9Z0S7 Cap2-205ENSMUST00000225824 1634 ntBASIC20.38■□□□□ 0.85
Cldn9Q9Z0S7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn9Q9Z0S7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn9Q9Z0S7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cldn9Q9Z0S7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn9Q9Z0S7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn9Q9Z0S7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn9Q9Z0S7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn9Q9Z0S7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cldn9Q9Z0S7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn9Q9Z0S7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.36■□□□□ 0.85
Cldn9Q9Z0S7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn9Q9Z0S7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn9Q9Z0S7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn9Q9Z0S7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn9Q9Z0S7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn9Q9Z0S7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn9Q9Z0S7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cldn9Q9Z0S7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.32■□□□□ 0.84
Cldn9Q9Z0S7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn9Q9Z0S7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn9Q9Z0S7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn9Q9Z0S7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn9Q9Z0S7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cldn9Q9Z0S7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn9Q9Z0S7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cldn9Q9Z0S7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cldn9Q9Z0S7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn9Q9Z0S7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cldn9Q9Z0S7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
Cldn9Q9Z0S7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn9Q9Z0S7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn9Q9Z0S7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn9Q9Z0S7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn9Q9Z0S7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn9Q9Z0S7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cldn9Q9Z0S7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cldn9Q9Z0S7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.26■□□□□ 0.83
Cldn9Q9Z0S7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn9Q9Z0S7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn9Q9Z0S7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.25■□□□□ 0.83
Cldn9Q9Z0S7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms