Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn13Q9Z0S4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn13Q9Z0S4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn13Q9Z0S4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Cldn13Q9Z0S4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn13Q9Z0S4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn13Q9Z0S4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn13Q9Z0S4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn13Q9Z0S4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Gm43566-201ENSMUST00000196851 808 ntBASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Cldn13Q9Z0S4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn13Q9Z0S4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cldn13Q9Z0S4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn13Q9Z0S4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn13Q9Z0S4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn13Q9Z0S4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn13Q9Z0S4 Gm5812-201ENSMUST00000061073 957 ntBASIC18.8■□□□□ 0.6
Cldn13Q9Z0S4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldn13Q9Z0S4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn13Q9Z0S4 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.78■□□□□ 0.6
Cldn13Q9Z0S4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn13Q9Z0S4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn13Q9Z0S4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn13Q9Z0S4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn13Q9Z0S4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn13Q9Z0S4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn13Q9Z0S4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn13Q9Z0S4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cldn13Q9Z0S4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn13Q9Z0S4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn13Q9Z0S4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn13Q9Z0S4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cldn13Q9Z0S4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn13Q9Z0S4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Cldn13Q9Z0S4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn13Q9Z0S4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn13Q9Z0S4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn13Q9Z0S4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn13Q9Z0S4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.73■□□□□ 0.59
Cldn13Q9Z0S4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms