Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Gm5874-201ENSMUST00000096101 508 ntBASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lhx6Q9R1R0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lhx6Q9R1R0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.68■□□□□ 0.74
Lhx6Q9R1R0 Gm7291-201ENSMUST00000199147 382 ntBASIC19.68■□□□□ 0.74
Lhx6Q9R1R0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lhx6Q9R1R0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Lhx6Q9R1R0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Gm15823-201ENSMUST00000064305 670 ntBASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lhx6Q9R1R0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx6Q9R1R0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx6Q9R1R0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx6Q9R1R0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.66■□□□□ 0.74
Lhx6Q9R1R0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lhx6Q9R1R0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lhx6Q9R1R0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx6Q9R1R0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx6Q9R1R0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx6Q9R1R0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lhx6Q9R1R0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lhx6Q9R1R0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lhx6Q9R1R0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.61■□□□□ 0.73
Lhx6Q9R1R0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx6Q9R1R0 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.61■□□□□ 0.73
Lhx6Q9R1R0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx6Q9R1R0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
Lhx6Q9R1R0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lhx6Q9R1R0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lhx6Q9R1R0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.59■□□□□ 0.73
Lhx6Q9R1R0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms