Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Herpud1Q9JJK5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Herpud1Q9JJK5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Herpud1Q9JJK5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Herpud1Q9JJK5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Gm14523-201ENSMUST00000117260 558 ntBASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Herpud1Q9JJK5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Herpud1Q9JJK5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.52■□□□□ 0.39
Herpud1Q9JJK5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Herpud1Q9JJK5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Herpud1Q9JJK5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herpud1Q9JJK5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Herpud1Q9JJK5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Herpud1Q9JJK5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Herpud1Q9JJK5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Herpud1Q9JJK5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Herpud1Q9JJK5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herpud1Q9JJK5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.47■□□□□ 0.39
Herpud1Q9JJK5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herpud1Q9JJK5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herpud1Q9JJK5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Herpud1Q9JJK5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Herpud1Q9JJK5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Gm7332-201ENSMUST00000118351 454 ntBASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Herpud1Q9JJK5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herpud1Q9JJK5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Herpud1Q9JJK5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herpud1Q9JJK5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms