Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssmem1Q9D9Y8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssmem1Q9D9Y8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ssmem1Q9D9Y8 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.27■□□□□ 0.52
Ssmem1Q9D9Y8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssmem1Q9D9Y8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssmem1Q9D9Y8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssmem1Q9D9Y8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssmem1Q9D9Y8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssmem1Q9D9Y8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Rps24-207ENSMUST00000224568 714 ntBASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssmem1Q9D9Y8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ssmem1Q9D9Y8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ssmem1Q9D9Y8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Gm10399-202ENSMUST00000202768 748 ntBASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssmem1Q9D9Y8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssmem1Q9D9Y8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Gm45102-201ENSMUST00000207427 857 ntBASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssmem1Q9D9Y8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Etf1-202ENSMUST00000180351 108 ntBASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Gm40881-201ENSMUST00000223397 166 ntBASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Ssmem1Q9D9Y8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms