Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raf1Q99N57 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Raf1Q99N57 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.85■□□□□ 0.61
Raf1Q99N57 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Raf1Q99N57 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raf1Q99N57 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Raf1Q99N57 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raf1Q99N57 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raf1Q99N57 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raf1Q99N57 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Raf1Q99N57 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Raf1Q99N57 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.84■□□□□ 0.61
Raf1Q99N57 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Raf1Q99N57 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Raf1Q99N57 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Raf1Q99N57 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Raf1Q99N57 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Raf1Q99N57 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.83■□□□□ 0.6
Raf1Q99N57 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Raf1Q99N57 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Raf1Q99N57 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Raf1Q99N57 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.82■□□□□ 0.6
Raf1Q99N57 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Raf1Q99N57 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raf1Q99N57 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Raf1Q99N57 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Raf1Q99N57 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Raf1Q99N57 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raf1Q99N57 Gm10420-201ENSMUST00000121713 882 ntBASIC18.81■□□□□ 0.6
Raf1Q99N57 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raf1Q99N57 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.81■□□□□ 0.6
Raf1Q99N57 Gm5812-201ENSMUST00000061073 957 ntBASIC18.81■□□□□ 0.6
Raf1Q99N57 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raf1Q99N57 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Raf1Q99N57 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Raf1Q99N57 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Raf1Q99N57 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raf1Q99N57 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.8■□□□□ 0.6
Raf1Q99N57 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Raf1Q99N57 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Raf1Q99N57 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raf1Q99N57 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Raf1Q99N57 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.8■□□□□ 0.6
Raf1Q99N57 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Raf1Q99N57 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Raf1Q99N57 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Raf1Q99N57 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.79■□□□□ 0.6
Raf1Q99N57 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Raf1Q99N57 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Raf1Q99N57 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Raf1Q99N57 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.78■□□□□ 0.6
Raf1Q99N57 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Raf1Q99N57 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Raf1Q99N57 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.77■□□□□ 0.6
Raf1Q99N57 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Gm5921-201ENSMUST00000075898 882 ntBASIC18.77■□□□□ 0.6
Raf1Q99N57 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raf1Q99N57 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Raf1Q99N57 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Raf1Q99N57 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raf1Q99N57 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raf1Q99N57 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raf1Q99N57 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.76■□□□□ 0.59
Raf1Q99N57 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raf1Q99N57 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.75■□□□□ 0.59
Raf1Q99N57 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Raf1Q99N57 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Raf1Q99N57 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Raf1Q99N57 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms