Protein–RNA interactions for Protein: Q99M28

Rnps1, RNA-binding protein with serine-rich domain 1, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnps1Q99M28 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnps1Q99M28 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnps1Q99M28 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnps1Q99M28 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Rnps1Q99M28 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Etf1-202ENSMUST00000180351 108 ntBASIC18.7■□□□□ 0.58
Rnps1Q99M28 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Gm9959-201ENSMUST00000068277 390 ntBASIC18.7■□□□□ 0.58
Rnps1Q99M28 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rnps1Q99M28 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnps1Q99M28 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnps1Q99M28 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnps1Q99M28 Gm40881-201ENSMUST00000223397 166 ntBASIC18.68■□□□□ 0.58
Rnps1Q99M28 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnps1Q99M28 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnps1Q99M28 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Rnps1Q99M28 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnps1Q99M28 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnps1Q99M28 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
Rnps1Q99M28 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Rnps1Q99M28 Gm7417-201ENSMUST00000192950 473 ntBASIC18.66■□□□□ 0.58
Rnps1Q99M28 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnps1Q99M28 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnps1Q99M28 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.66■□□□□ 0.58
Rnps1Q99M28 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnps1Q99M28 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnps1Q99M28 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rnps1Q99M28 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnps1Q99M28 Gm14117-201ENSMUST00000122417 843 ntBASIC18.65■□□□□ 0.58
Rnps1Q99M28 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnps1Q99M28 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnps1Q99M28 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnps1Q99M28 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnps1Q99M28 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnps1Q99M28 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rnps1Q99M28 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rnps1Q99M28 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnps1Q99M28 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnps1Q99M28 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnps1Q99M28 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.61■□□□□ 0.57
Rnps1Q99M28 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms