Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdhgc3Q91XX1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pcdhgc3Q91XX1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgc3Q91XX1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhgc3Q91XX1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgc3Q91XX1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Pcdhgc3Q91XX1 Gm9812-201ENSMUST00000061934 968 ntBASIC19.91■□□□□ 0.78
Pcdhgc3Q91XX1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhgc3Q91XX1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc3Q91XX1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhgc3Q91XX1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhgc3Q91XX1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc3Q91XX1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Gm4799-201ENSMUST00000095396 657 ntBASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhgc3Q91XX1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc3Q91XX1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc3Q91XX1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc3Q91XX1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc3Q91XX1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhgc3Q91XX1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc3Q91XX1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.85■□□□□ 0.77
Pcdhgc3Q91XX1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdhgc3Q91XX1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Pcdhgc3Q91XX1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgc3Q91XX1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgc3Q91XX1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgc3Q91XX1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgc3Q91XX1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Pcdhgc3Q91XX1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgc3Q91XX1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhgc3Q91XX1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgc3Q91XX1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgc3Q91XX1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdhgc3Q91XX1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgc3Q91XX1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgc3Q91XX1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms