Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa1Q8VEE4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.25■□□□□ 0.99
Rpa1Q8VEE4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpa1Q8VEE4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rpa1Q8VEE4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Gm45364-201ENSMUST00000210883 159 ntBASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rpa1Q8VEE4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rpa1Q8VEE4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpa1Q8VEE4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpa1Q8VEE4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rpa1Q8VEE4 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.21■□□□□ 0.99
Rpa1Q8VEE4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rpa1Q8VEE4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpa1Q8VEE4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa1Q8VEE4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa1Q8VEE4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa1Q8VEE4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa1Q8VEE4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa1Q8VEE4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rpa1Q8VEE4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpa1Q8VEE4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.16■□□□□ 0.98
Rpa1Q8VEE4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpa1Q8VEE4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpa1Q8VEE4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpa1Q8VEE4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpa1Q8VEE4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpa1Q8VEE4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpa1Q8VEE4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rpa1Q8VEE4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpa1Q8VEE4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.13■□□□□ 0.97
Rpa1Q8VEE4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpa1Q8VEE4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpa1Q8VEE4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rpa1Q8VEE4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpa1Q8VEE4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa1Q8VEE4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa1Q8VEE4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa1Q8VEE4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa1Q8VEE4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa1Q8VEE4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpa1Q8VEE4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpa1Q8VEE4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms