Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nckap1lQ8K1X4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.49■□□□□ 0.87
Nckap1lQ8K1X4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nckap1lQ8K1X4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.47■□□□□ 0.87
Nckap1lQ8K1X4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nckap1lQ8K1X4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.47■□□□□ 0.87
Nckap1lQ8K1X4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.47■□□□□ 0.87
Nckap1lQ8K1X4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nckap1lQ8K1X4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nckap1lQ8K1X4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Nckap1lQ8K1X4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Cap2-205ENSMUST00000225824 1634 ntBASIC20.45■□□□□ 0.86
Nckap1lQ8K1X4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nckap1lQ8K1X4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1lQ8K1X4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1lQ8K1X4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1lQ8K1X4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1lQ8K1X4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nckap1lQ8K1X4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nckap1lQ8K1X4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nckap1lQ8K1X4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nckap1lQ8K1X4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1lQ8K1X4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1lQ8K1X4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nckap1lQ8K1X4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nckap1lQ8K1X4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nckap1lQ8K1X4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nckap1lQ8K1X4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nckap1lQ8K1X4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nckap1lQ8K1X4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms