Protein–RNA interactions for Protein: Q8K0S9

Snapc1, snRNA-activating protein complex subunit 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc1Q8K0S9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.33■□□□□ 0.85
Snapc1Q8K0S9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snapc1Q8K0S9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snapc1Q8K0S9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
Snapc1Q8K0S9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snapc1Q8K0S9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snapc1Q8K0S9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snapc1Q8K0S9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snapc1Q8K0S9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
Snapc1Q8K0S9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Snapc1Q8K0S9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snapc1Q8K0S9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snapc1Q8K0S9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snapc1Q8K0S9 Mir3960-201ENSMUST00000198213 73 ntBASIC20.3■□□□□ 0.84
Snapc1Q8K0S9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.3■□□□□ 0.84
Snapc1Q8K0S9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snapc1Q8K0S9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Snapc1Q8K0S9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Snapc1Q8K0S9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Snapc1Q8K0S9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snapc1Q8K0S9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snapc1Q8K0S9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snapc1Q8K0S9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Snapc1Q8K0S9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Snapc1Q8K0S9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snapc1Q8K0S9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Snapc1Q8K0S9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Snapc1Q8K0S9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.27■□□□□ 0.84
Snapc1Q8K0S9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snapc1Q8K0S9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snapc1Q8K0S9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snapc1Q8K0S9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Snapc1Q8K0S9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Snapc1Q8K0S9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snapc1Q8K0S9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snapc1Q8K0S9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snapc1Q8K0S9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snapc1Q8K0S9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snapc1Q8K0S9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 Gm45364-201ENSMUST00000210883 159 ntBASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snapc1Q8K0S9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Snapc1Q8K0S9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Snapc1Q8K0S9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snapc1Q8K0S9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snapc1Q8K0S9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snapc1Q8K0S9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snapc1Q8K0S9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snapc1Q8K0S9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Snapc1Q8K0S9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snapc1Q8K0S9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Snapc1Q8K0S9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.21■□□□□ 0.83
Snapc1Q8K0S9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Snapc1Q8K0S9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Snapc1Q8K0S9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Snapc1Q8K0S9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snapc1Q8K0S9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.19■□□□□ 0.82
Snapc1Q8K0S9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms