Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Lysmd4Q8CC84 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Lysmd4Q8CC84 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lysmd4Q8CC84 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.96■□□□□ 0.63
Lysmd4Q8CC84 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd4Q8CC84 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lysmd4Q8CC84 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd4Q8CC84 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.96■□□□□ 0.63
Lysmd4Q8CC84 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd4Q8CC84 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd4Q8CC84 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd4Q8CC84 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lysmd4Q8CC84 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lysmd4Q8CC84 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lysmd4Q8CC84 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd4Q8CC84 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd4Q8CC84 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd4Q8CC84 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lysmd4Q8CC84 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd4Q8CC84 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Lysmd4Q8CC84 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd4Q8CC84 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd4Q8CC84 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lysmd4Q8CC84 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.87■□□□□ 0.61
Lysmd4Q8CC84 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms