Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Gm9847-201ENSMUST00000052528 599 ntBASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3rf2Q8BZT2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3rf2Q8BZT2 Gm13241-201ENSMUST00000094493 780 ntBASIC21.56■■□□□ 1.04
Sh3rf2Q8BZT2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sh3rf2Q8BZT2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3rf2Q8BZT2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sh3rf2Q8BZT2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3rf2Q8BZT2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sh3rf2Q8BZT2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sh3rf2Q8BZT2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3rf2Q8BZT2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sh3rf2Q8BZT2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf2Q8BZT2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf2Q8BZT2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf2Q8BZT2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3rf2Q8BZT2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3rf2Q8BZT2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sh3rf2Q8BZT2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 Gm12922-201ENSMUST00000120626 809 ntBASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3rf2Q8BZT2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3rf2Q8BZT2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.46■■□□□ 1.03
Sh3rf2Q8BZT2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Sh3rf2Q8BZT2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.46■■□□□ 1.03
Sh3rf2Q8BZT2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.46■■□□□ 1.03
Sh3rf2Q8BZT2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.46■■□□□ 1.03
Sh3rf2Q8BZT2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.45■■□□□ 1.02
Sh3rf2Q8BZT2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.45■■□□□ 1.02
Sh3rf2Q8BZT2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3rf2Q8BZT2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3rf2Q8BZT2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms