Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4dQ8BGV9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4dQ8BGV9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Atg4dQ8BGV9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4dQ8BGV9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Atg4dQ8BGV9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4dQ8BGV9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Atg4dQ8BGV9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.85■□□□□ 0.77
Atg4dQ8BGV9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Atg4dQ8BGV9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Atg4dQ8BGV9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Atg4dQ8BGV9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Atg4dQ8BGV9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4dQ8BGV9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Atg4dQ8BGV9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Atg4dQ8BGV9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.82■□□□□ 0.76
Atg4dQ8BGV9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4dQ8BGV9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4dQ8BGV9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.8■□□□□ 0.76
Atg4dQ8BGV9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4dQ8BGV9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4dQ8BGV9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4dQ8BGV9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.8■□□□□ 0.76
Atg4dQ8BGV9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Atg4dQ8BGV9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Atg4dQ8BGV9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4dQ8BGV9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4dQ8BGV9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4dQ8BGV9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms