Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx42Q810A7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx42Q810A7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ddx42Q810A7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx42Q810A7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx42Q810A7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.27■■□□□ 1
Ddx42Q810A7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx42Q810A7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ddx42Q810A7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx42Q810A7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx42Q810A7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Ddx42Q810A7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx42Q810A7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx42Q810A7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx42Q810A7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx42Q810A7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.26■□□□□ 0.99
Ddx42Q810A7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx42Q810A7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx42Q810A7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ddx42Q810A7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx42Q810A7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx42Q810A7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx42Q810A7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx42Q810A7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx42Q810A7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx42Q810A7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.24■□□□□ 0.99
Ddx42Q810A7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.24■□□□□ 0.99
Ddx42Q810A7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx42Q810A7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx42Q810A7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ddx42Q810A7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Ddx42Q810A7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx42Q810A7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.23■□□□□ 0.99
Ddx42Q810A7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx42Q810A7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx42Q810A7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx42Q810A7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ddx42Q810A7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx42Q810A7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx42Q810A7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx42Q810A7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx42Q810A7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx42Q810A7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx42Q810A7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx42Q810A7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx42Q810A7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.21■□□□□ 0.99
Ddx42Q810A7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx42Q810A7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx42Q810A7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ddx42Q810A7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ddx42Q810A7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ddx42Q810A7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx42Q810A7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx42Q810A7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx42Q810A7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx42Q810A7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx42Q810A7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ddx42Q810A7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx42Q810A7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.17■□□□□ 0.98
Ddx42Q810A7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx42Q810A7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx42Q810A7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Gm5921-201ENSMUST00000075898 882 ntBASIC21.15■□□□□ 0.98
Ddx42Q810A7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx42Q810A7 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.14■□□□□ 0.98
Ddx42Q810A7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx42Q810A7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx42Q810A7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.14■□□□□ 0.97
Ddx42Q810A7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.14■□□□□ 0.97
Ddx42Q810A7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx42Q810A7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx42Q810A7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ddx42Q810A7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx42Q810A7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms