Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Rtl1Q7M732 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC38.44■■■■□ 3.74
Rtl1Q7M732 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
Rtl1Q7M732 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC38.43■■■■□ 3.74
Rtl1Q7M732 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC38.43■■■■□ 3.74
Rtl1Q7M732 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC38.42■■■■□ 3.74
Rtl1Q7M732 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC38.42■■■■□ 3.74
Rtl1Q7M732 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Etf1-202ENSMUST00000180351 108 ntBASIC38.41■■■■□ 3.74
Rtl1Q7M732 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rtl1Q7M732 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC38.4■■■■□ 3.74
Rtl1Q7M732 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC38.4■■■■□ 3.74
Rtl1Q7M732 H3f3aos-201ENSMUST00000097448 2905 ntBASIC38.4■■■■□ 3.74
Rtl1Q7M732 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
Rtl1Q7M732 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC38.4■■■■□ 3.74
Rtl1Q7M732 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC38.4■■■■□ 3.74
Rtl1Q7M732 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Rtl1Q7M732 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC38.38■■■■□ 3.73
Rtl1Q7M732 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Rtl1Q7M732 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Rtl1Q7M732 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Rtl1Q7M732 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC38.37■■■■□ 3.73
Rtl1Q7M732 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
Rtl1Q7M732 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC38.36■■■■□ 3.73
Rtl1Q7M732 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC38.36■■■■□ 3.73
Rtl1Q7M732 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
Rtl1Q7M732 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC38.35■■■■□ 3.73
Rtl1Q7M732 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Rtl1Q7M732 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC38.34■■■■□ 3.73
Rtl1Q7M732 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Rtl1Q7M732 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Rtl1Q7M732 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Rtl1Q7M732 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
Rtl1Q7M732 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC38.33■■■■□ 3.73
Rtl1Q7M732 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC38.33■■■■□ 3.73
Rtl1Q7M732 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC38.31■■■■□ 3.72
Rtl1Q7M732 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Rtl1Q7M732 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC38.31■■■■□ 3.72
Rtl1Q7M732 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC38.31■■■■□ 3.72
Rtl1Q7M732 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC38.3■■■■□ 3.72
Rtl1Q7M732 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Rtl1Q7M732 Gm7417-201ENSMUST00000192950 473 ntBASIC38.29■■■■□ 3.72
Rtl1Q7M732 Gm26766-202ENSMUST00000227544 2347 ntBASIC38.29■■■■□ 3.72
Rtl1Q7M732 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Rtl1Q7M732 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC38.28■■■■□ 3.72
Rtl1Q7M732 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC38.28■■■■□ 3.72
Rtl1Q7M732 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
Rtl1Q7M732 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Rtl1Q7M732 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC38.27■■■■□ 3.72
Rtl1Q7M732 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC38.27■■■■□ 3.72
Rtl1Q7M732 Gm42418-201ENSMUST00000182010 1831 ntBASIC38.27■■■■□ 3.72
Rtl1Q7M732 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
Rtl1Q7M732 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC38.26■■■■□ 3.72
Rtl1Q7M732 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC38.26■■■■□ 3.71
Rtl1Q7M732 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC38.26■■■■□ 3.71
Rtl1Q7M732 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.71
Rtl1Q7M732 Gm17641-201ENSMUST00000166328 2350 ntBASIC38.26■■■■□ 3.71
Rtl1Q7M732 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
Rtl1Q7M732 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC38.25■■■■□ 3.71
Rtl1Q7M732 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
Rtl1Q7M732 Gm10620-201ENSMUST00000098379 1332 ntBASIC38.24■■■■□ 3.71
Rtl1Q7M732 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC38.24■■■■□ 3.71
Rtl1Q7M732 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
Rtl1Q7M732 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC38.23■■■■□ 3.71
Rtl1Q7M732 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
Rtl1Q7M732 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC38.23■■■■□ 3.71
Rtl1Q7M732 AC116713.1-201ENSMUST00000215074 430 ntBASIC38.23■■■■□ 3.71
Rtl1Q7M732 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC38.23■■■■□ 3.71
Rtl1Q7M732 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC38.22■■■■□ 3.71
Rtl1Q7M732 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC38.22■■■■□ 3.71
Rtl1Q7M732 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Rtl1Q7M732 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC38.21■■■■□ 3.71
Rtl1Q7M732 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Rtl1Q7M732 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC38.21■■■■□ 3.71
Rtl1Q7M732 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
Rtl1Q7M732 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC38.21■■■■□ 3.71
Rtl1Q7M732 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC38.21■■■■□ 3.71
Rtl1Q7M732 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC38.21■■■■□ 3.71
Rtl1Q7M732 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC38.2■■■■□ 3.71
Rtl1Q7M732 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC38.2■■■■□ 3.71
Rtl1Q7M732 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Rtl1Q7M732 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Rtl1Q7M732 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC38.19■■■■□ 3.7
Rtl1Q7M732 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Rtl1Q7M732 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC38.18■■■■□ 3.7
Rtl1Q7M732 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms