Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Lsm8Q6ZWM4 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.31■■□□□ 1.16
Lsm8Q6ZWM4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
Lsm8Q6ZWM4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm8Q6ZWM4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Lsm8Q6ZWM4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm8Q6ZWM4 Gm43566-201ENSMUST00000196851 808 ntBASIC22.28■■□□□ 1.16
Lsm8Q6ZWM4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm8Q6ZWM4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Lsm8Q6ZWM4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lsm8Q6ZWM4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Lsm8Q6ZWM4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.27■■□□□ 1.16
Lsm8Q6ZWM4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm8Q6ZWM4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm8Q6ZWM4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Gm13238-201ENSMUST00000117655 780 ntBASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lsm8Q6ZWM4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lsm8Q6ZWM4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Lsm8Q6ZWM4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lsm8Q6ZWM4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lsm8Q6ZWM4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lsm8Q6ZWM4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Lsm8Q6ZWM4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lsm8Q6ZWM4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lsm8Q6ZWM4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lsm8Q6ZWM4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Lsm8Q6ZWM4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lsm8Q6ZWM4 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.22■■□□□ 1.15
Lsm8Q6ZWM4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lsm8Q6ZWM4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lsm8Q6ZWM4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.2■■□□□ 1.14
Lsm8Q6ZWM4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Lsm8Q6ZWM4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
Lsm8Q6ZWM4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lsm8Q6ZWM4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lsm8Q6ZWM4 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.19■■□□□ 1.14
Lsm8Q6ZWM4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Lsm8Q6ZWM4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms