Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.9■□□□□ 0.78
Rnf220Q6PDX6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf220Q6PDX6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf220Q6PDX6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf220Q6PDX6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf220Q6PDX6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf220Q6PDX6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf220Q6PDX6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rnf220Q6PDX6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf220Q6PDX6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf220Q6PDX6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf220Q6PDX6 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf220Q6PDX6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf220Q6PDX6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf220Q6PDX6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf220Q6PDX6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rnf220Q6PDX6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rnf220Q6PDX6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf220Q6PDX6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf220Q6PDX6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rnf220Q6PDX6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf220Q6PDX6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf220Q6PDX6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.81■□□□□ 0.76
Rnf220Q6PDX6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.81■□□□□ 0.76
Rnf220Q6PDX6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rnf220Q6PDX6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf220Q6PDX6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf220Q6PDX6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf220Q6PDX6 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.8■□□□□ 0.76
Rnf220Q6PDX6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf220Q6PDX6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf220Q6PDX6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf220Q6PDX6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf220Q6PDX6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.78■□□□□ 0.76
Rnf220Q6PDX6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf220Q6PDX6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf220Q6PDX6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rnf220Q6PDX6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf220Q6PDX6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf220Q6PDX6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf220Q6PDX6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf220Q6PDX6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf220Q6PDX6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf220Q6PDX6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf220Q6PDX6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf220Q6PDX6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf220Q6PDX6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms