Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rundc3bQ6PDC0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rundc3bQ6PDC0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.88■□□□□ 0.77
Rundc3bQ6PDC0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rundc3bQ6PDC0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rundc3bQ6PDC0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rundc3bQ6PDC0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rundc3bQ6PDC0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rundc3bQ6PDC0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rundc3bQ6PDC0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rundc3bQ6PDC0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
Rundc3bQ6PDC0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rundc3bQ6PDC0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.84■□□□□ 0.77
Rundc3bQ6PDC0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.83■□□□□ 0.77
Rundc3bQ6PDC0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rundc3bQ6PDC0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rundc3bQ6PDC0 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.83■□□□□ 0.77
Rundc3bQ6PDC0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3bQ6PDC0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3bQ6PDC0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.83■□□□□ 0.76
Rundc3bQ6PDC0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3bQ6PDC0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3bQ6PDC0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.83■□□□□ 0.76
Rundc3bQ6PDC0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rundc3bQ6PDC0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rundc3bQ6PDC0 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.82■□□□□ 0.76
Rundc3bQ6PDC0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Rundc3bQ6PDC0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3bQ6PDC0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rundc3bQ6PDC0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rundc3bQ6PDC0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rundc3bQ6PDC0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3bQ6PDC0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3bQ6PDC0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3bQ6PDC0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.77■□□□□ 0.76
Rundc3bQ6PDC0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.77■□□□□ 0.76
Rundc3bQ6PDC0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3bQ6PDC0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3bQ6PDC0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3bQ6PDC0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3bQ6PDC0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rundc3bQ6PDC0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Gm9812-201ENSMUST00000061934 968 ntBASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms