Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Clns1aQ61189 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clns1aQ61189 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Clns1aQ61189 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Clns1aQ61189 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Clns1aQ61189 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clns1aQ61189 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clns1aQ61189 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clns1aQ61189 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clns1aQ61189 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Clns1aQ61189 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Clns1aQ61189 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Clns1aQ61189 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18■□□□□ 0.47
Clns1aQ61189 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Clns1aQ61189 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Clns1aQ61189 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18■□□□□ 0.47
Clns1aQ61189 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18■□□□□ 0.47
Clns1aQ61189 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18■□□□□ 0.47
Clns1aQ61189 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Clns1aQ61189 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Clns1aQ61189 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Clns1aQ61189 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.99■□□□□ 0.47
Clns1aQ61189 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Clns1aQ61189 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Clns1aQ61189 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clns1aQ61189 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clns1aQ61189 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clns1aQ61189 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clns1aQ61189 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clns1aQ61189 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clns1aQ61189 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.98■□□□□ 0.47
Clns1aQ61189 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clns1aQ61189 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.98■□□□□ 0.47
Clns1aQ61189 Terc-201ENSMUST00000082862 423 ntBASIC17.98■□□□□ 0.47
Clns1aQ61189 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clns1aQ61189 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clns1aQ61189 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clns1aQ61189 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.97■□□□□ 0.47
Clns1aQ61189 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clns1aQ61189 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clns1aQ61189 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clns1aQ61189 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clns1aQ61189 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Clns1aQ61189 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clns1aQ61189 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clns1aQ61189 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.96■□□□□ 0.47
Clns1aQ61189 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Clns1aQ61189 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clns1aQ61189 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clns1aQ61189 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clns1aQ61189 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clns1aQ61189 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clns1aQ61189 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Clns1aQ61189 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
Clns1aQ61189 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clns1aQ61189 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.94■□□□□ 0.46
Clns1aQ61189 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clns1aQ61189 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Clns1aQ61189 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clns1aQ61189 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.93■□□□□ 0.46
Clns1aQ61189 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clns1aQ61189 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.93■□□□□ 0.46
Clns1aQ61189 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clns1aQ61189 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clns1aQ61189 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Clns1aQ61189 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clns1aQ61189 Mir3960-201ENSMUST00000198213 73 ntBASIC17.92■□□□□ 0.46
Clns1aQ61189 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clns1aQ61189 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clns1aQ61189 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clns1aQ61189 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clns1aQ61189 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Clns1aQ61189 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clns1aQ61189 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.91■□□□□ 0.46
Clns1aQ61189 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
Clns1aQ61189 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.91■□□□□ 0.46
Clns1aQ61189 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clns1aQ61189 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Clns1aQ61189 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clns1aQ61189 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Clns1aQ61189 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clns1aQ61189 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms