Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trav7d-3Q5R1I1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-3Q5R1I1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-3Q5R1I1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-3Q5R1I1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav7d-3Q5R1I1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Notumos-201ENSMUST00000151998 2659 ntBASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav7d-3Q5R1I1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav7d-3Q5R1I1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7d-3Q5R1I1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Trav7d-3Q5R1I1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav7d-3Q5R1I1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trav7d-3Q5R1I1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7d-3Q5R1I1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7d-3Q5R1I1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7d-3Q5R1I1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trav7d-3Q5R1I1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7d-3Q5R1I1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trav7d-3Q5R1I1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-3Q5R1I1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav7d-3Q5R1I1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-3Q5R1I1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-3Q5R1I1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7d-3Q5R1I1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav7d-3Q5R1I1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7d-3Q5R1I1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms