Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.19■□□□□ 0.98
Col27a1Q5QNQ9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Col27a1Q5QNQ9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.19■□□□□ 0.98
Col27a1Q5QNQ9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col27a1Q5QNQ9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col27a1Q5QNQ9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col27a1Q5QNQ9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Col27a1Q5QNQ9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col27a1Q5QNQ9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.16■□□□□ 0.98
Col27a1Q5QNQ9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col27a1Q5QNQ9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col27a1Q5QNQ9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col27a1Q5QNQ9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.98
Col27a1Q5QNQ9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col27a1Q5QNQ9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col27a1Q5QNQ9 Gm37179-201ENSMUST00000194862 823 ntBASIC21.14■□□□□ 0.97
Col27a1Q5QNQ9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.14■□□□□ 0.97
Col27a1Q5QNQ9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col27a1Q5QNQ9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Col27a1Q5QNQ9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col27a1Q5QNQ9 Gm27405-201ENSMUST00000184201 112 ntBASIC21.11■□□□□ 0.97
Col27a1Q5QNQ9 Gm10493-201ENSMUST00000097270 612 ntBASIC21.11■□□□□ 0.97
Col27a1Q5QNQ9 Gm10849-201ENSMUST00000100397 618 ntBASIC21.11■□□□□ 0.97
Col27a1Q5QNQ9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.11■□□□□ 0.97
Col27a1Q5QNQ9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col27a1Q5QNQ9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col27a1Q5QNQ9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Col27a1Q5QNQ9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.09■□□□□ 0.97
Col27a1Q5QNQ9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.08■□□□□ 0.97
Col27a1Q5QNQ9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col27a1Q5QNQ9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.08■□□□□ 0.97
Col27a1Q5QNQ9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.08■□□□□ 0.96
Col27a1Q5QNQ9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col27a1Q5QNQ9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col27a1Q5QNQ9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.08■□□□□ 0.96
Col27a1Q5QNQ9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col27a1Q5QNQ9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col27a1Q5QNQ9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col27a1Q5QNQ9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col27a1Q5QNQ9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.07■□□□□ 0.96
Col27a1Q5QNQ9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col27a1Q5QNQ9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col27a1Q5QNQ9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col27a1Q5QNQ9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col27a1Q5QNQ9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms