Protein–RNA interactions for Protein: Q3UM18

Lsg1, Large subunit GTPase 1 homolog, mousemouse

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1Q3UM18 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsg1Q3UM18 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lsg1Q3UM18 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.33■□□□□ 0.84
Lsg1Q3UM18 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.33■□□□□ 0.84
Lsg1Q3UM18 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsg1Q3UM18 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsg1Q3UM18 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Lsg1Q3UM18 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsg1Q3UM18 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsg1Q3UM18 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.32■□□□□ 0.84
Lsg1Q3UM18 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsg1Q3UM18 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsg1Q3UM18 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.31■□□□□ 0.84
Lsg1Q3UM18 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsg1Q3UM18 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsg1Q3UM18 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsg1Q3UM18 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsg1Q3UM18 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsg1Q3UM18 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsg1Q3UM18 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.27■□□□□ 0.84
Lsg1Q3UM18 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsg1Q3UM18 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsg1Q3UM18 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Lsg1Q3UM18 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsg1Q3UM18 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsg1Q3UM18 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsg1Q3UM18 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsg1Q3UM18 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsg1Q3UM18 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lsg1Q3UM18 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.24■□□□□ 0.83
Lsg1Q3UM18 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsg1Q3UM18 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsg1Q3UM18 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.23■□□□□ 0.83
Lsg1Q3UM18 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Gm22567-201ENSMUST00000175542 342 ntBASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsg1Q3UM18 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Gm12366-201ENSMUST00000121722 873 ntBASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.21■□□□□ 0.83
Lsg1Q3UM18 Gm5786-201ENSMUST00000085368 882 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms