Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Iqck-206ENSMUST00000208658 2891 ntBASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Fndc4Q3TR08 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Fndc4Q3TR08 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Fndc4Q3TR08 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.86■□□□□ 0.45
Fndc4Q3TR08 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.86■□□□□ 0.45
Fndc4Q3TR08 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.86■□□□□ 0.45
Fndc4Q3TR08 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Fndc4Q3TR08 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fndc4Q3TR08 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fndc4Q3TR08 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Gm22567-201ENSMUST00000175542 342 ntBASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
Fndc4Q3TR08 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Fndc4Q3TR08 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Fndc4Q3TR08 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Fndc4Q3TR08 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Fndc4Q3TR08 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fndc4Q3TR08 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Fndc4Q3TR08 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Fndc4Q3TR08 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.83■□□□□ 0.44
Fndc4Q3TR08 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fndc4Q3TR08 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fndc4Q3TR08 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fndc4Q3TR08 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Gm27502-201ENSMUST00000183495 199 ntBASIC17.8■□□□□ 0.44
Fndc4Q3TR08 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Fndc4Q3TR08 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.79■□□□□ 0.44
Fndc4Q3TR08 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms