Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pfn1P62962 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pfn1P62962 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pfn1P62962 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pfn1P62962 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.35■□□□□ 0.21
Pfn1P62962 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pfn1P62962 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pfn1P62962 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pfn1P62962 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pfn1P62962 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pfn1P62962 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.34■□□□□ 0.21
Pfn1P62962 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.34■□□□□ 0.21
Pfn1P62962 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pfn1P62962 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.34■□□□□ 0.21
Pfn1P62962 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pfn1P62962 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pfn1P62962 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfn1P62962 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfn1P62962 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.33■□□□□ 0.2
Pfn1P62962 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pfn1P62962 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfn1P62962 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pfn1P62962 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pfn1P62962 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pfn1P62962 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.32■□□□□ 0.2
Pfn1P62962 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.32■□□□□ 0.2
Pfn1P62962 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfn1P62962 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfn1P62962 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pfn1P62962 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.31■□□□□ 0.2
Pfn1P62962 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.31■□□□□ 0.2
Pfn1P62962 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.31■□□□□ 0.2
Pfn1P62962 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfn1P62962 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pfn1P62962 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pfn1P62962 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pfn1P62962 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfn1P62962 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfn1P62962 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfn1P62962 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfn1P62962 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.3■□□□□ 0.2
Pfn1P62962 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pfn1P62962 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Pfn1P62962 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pfn1P62962 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pfn1P62962 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfn1P62962 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pfn1P62962 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfn1P62962 Gm6821-201ENSMUST00000107540 542 ntBASIC16.29■□□□□ 0.2
Pfn1P62962 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfn1P62962 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Pfn1P62962 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pfn1P62962 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.29■□□□□ 0.2
Pfn1P62962 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pfn1P62962 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pfn1P62962 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pfn1P62962 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pfn1P62962 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.28■□□□□ 0.2
Pfn1P62962 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pfn1P62962 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.27■□□□□ 0.2
Pfn1P62962 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.27■□□□□ 0.2
Pfn1P62962 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.27■□□□□ 0.2
Pfn1P62962 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pfn1P62962 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.27■□□□□ 0.2
Pfn1P62962 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pfn1P62962 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.27■□□□□ 0.2
Pfn1P62962 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pfn1P62962 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pfn1P62962 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pfn1P62962 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.27■□□□□ 0.19
Pfn1P62962 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.27■□□□□ 0.19
Pfn1P62962 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pfn1P62962 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pfn1P62962 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pfn1P62962 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.26■□□□□ 0.19
Pfn1P62962 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pfn1P62962 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms