Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a1P61620 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sec61a1P61620 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sec61a1P61620 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sec61a1P61620 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sec61a1P61620 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sec61a1P61620 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sec61a1P61620 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sec61a1P61620 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sec61a1P61620 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sec61a1P61620 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.46■□□□□ 0.55
Sec61a1P61620 Gm10420-201ENSMUST00000121713 882 ntBASIC18.46■□□□□ 0.55
Sec61a1P61620 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.46■□□□□ 0.55
Sec61a1P61620 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.46■□□□□ 0.55
Sec61a1P61620 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.46■□□□□ 0.55
Sec61a1P61620 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.46■□□□□ 0.55
Sec61a1P61620 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Sec61a1P61620 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sec61a1P61620 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.46■□□□□ 0.55
Sec61a1P61620 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.45■□□□□ 0.54
Sec61a1P61620 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sec61a1P61620 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.45■□□□□ 0.54
Sec61a1P61620 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.44■□□□□ 0.54
Sec61a1P61620 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Sec61a1P61620 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a1P61620 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sec61a1P61620 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.43■□□□□ 0.54
Sec61a1P61620 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sec61a1P61620 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sec61a1P61620 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sec61a1P61620 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a1P61620 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sec61a1P61620 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a1P61620 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sec61a1P61620 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a1P61620 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a1P61620 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a1P61620 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a1P61620 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a1P61620 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a1P61620 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.4■□□□□ 0.54
Sec61a1P61620 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a1P61620 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a1P61620 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sec61a1P61620 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a1P61620 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sec61a1P61620 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Sec61a1P61620 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sec61a1P61620 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sec61a1P61620 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sec61a1P61620 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a1P61620 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a1P61620 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a1P61620 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a1P61620 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a1P61620 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.38■□□□□ 0.53
Sec61a1P61620 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a1P61620 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sec61a1P61620 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.37■□□□□ 0.53
Sec61a1P61620 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a1P61620 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.37■□□□□ 0.53
Sec61a1P61620 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Sec61a1P61620 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a1P61620 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sec61a1P61620 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.36■□□□□ 0.53
Sec61a1P61620 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sec61a1P61620 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sec61a1P61620 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sec61a1P61620 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sec61a1P61620 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a1P61620 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms