Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.06■□□□□ 0.96
Fdft1P53798 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fdft1P53798 Cap2-205ENSMUST00000225824 1634 ntBASIC21.06■□□□□ 0.96
Fdft1P53798 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Fdft1P53798 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Fdft1P53798 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Fdft1P53798 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.05■□□□□ 0.96
Fdft1P53798 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Fdft1P53798 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Fdft1P53798 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Fdft1P53798 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fdft1P53798 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Fdft1P53798 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Fdft1P53798 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Fdft1P53798 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.04■□□□□ 0.96
Fdft1P53798 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.03■□□□□ 0.96
Fdft1P53798 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.03■□□□□ 0.96
Fdft1P53798 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Fdft1P53798 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Fdft1P53798 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Fdft1P53798 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.02■□□□□ 0.96
Fdft1P53798 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.02■□□□□ 0.96
Fdft1P53798 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.02■□□□□ 0.96
Fdft1P53798 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Fdft1P53798 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Fdft1P53798 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.01■□□□□ 0.95
Fdft1P53798 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Fdft1P53798 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
Fdft1P53798 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21■□□□□ 0.95
Fdft1P53798 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21■□□□□ 0.95
Fdft1P53798 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fdft1P53798 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fdft1P53798 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.99■□□□□ 0.95
Fdft1P53798 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.99■□□□□ 0.95
Fdft1P53798 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fdft1P53798 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Fdft1P53798 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Fdft1P53798 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Fdft1P53798 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Fdft1P53798 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Fdft1P53798 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.98■□□□□ 0.95
Fdft1P53798 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Fdft1P53798 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Fdft1P53798 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.96■□□□□ 0.95
Fdft1P53798 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.96■□□□□ 0.95
Fdft1P53798 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Fdft1P53798 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Fdft1P53798 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Fdft1P53798 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Fdft1P53798 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Fdft1P53798 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Fdft1P53798 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fdft1P53798 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Fdft1P53798 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.94■□□□□ 0.94
Fdft1P53798 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Fdft1P53798 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Fdft1P53798 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Fdft1P53798 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.93■□□□□ 0.94
Fdft1P53798 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms