Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh2P43247 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh2P43247 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh2P43247 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh2P43247 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Msh2P43247 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Msh2P43247 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Msh2P43247 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh2P43247 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh2P43247 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh2P43247 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Msh2P43247 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh2P43247 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh2P43247 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.73■■□□□ 1.07
Msh2P43247 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh2P43247 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Msh2P43247 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh2P43247 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Msh2P43247 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.72■■□□□ 1.07
Msh2P43247 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh2P43247 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh2P43247 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh2P43247 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Msh2P43247 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Msh2P43247 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.71■■□□□ 1.07
Msh2P43247 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Msh2P43247 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Msh2P43247 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh2P43247 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh2P43247 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh2P43247 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh2P43247 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.69■■□□□ 1.06
Msh2P43247 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Msh2P43247 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh2P43247 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh2P43247 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh2P43247 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.68■■□□□ 1.06
Msh2P43247 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Msh2P43247 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh2P43247 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh2P43247 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Msh2P43247 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh2P43247 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh2P43247 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh2P43247 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Msh2P43247 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Msh2P43247 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh2P43247 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh2P43247 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh2P43247 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Msh2P43247 Gm10420-201ENSMUST00000121713 882 ntBASIC21.66■■□□□ 1.06
Msh2P43247 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.66■■□□□ 1.06
Msh2P43247 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.66■■□□□ 1.06
Msh2P43247 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh2P43247 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Msh2P43247 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh2P43247 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.65■■□□□ 1.06
Msh2P43247 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Msh2P43247 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh2P43247 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Msh2P43247 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.64■■□□□ 1.06
Msh2P43247 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh2P43247 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Msh2P43247 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.64■■□□□ 1.05
Msh2P43247 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Msh2P43247 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh2P43247 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Msh2P43247 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh2P43247 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh2P43247 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Msh2P43247 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh2P43247 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Msh2P43247 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh2P43247 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Msh2P43247 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh2P43247 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.61■■□□□ 1.05
Msh2P43247 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh2P43247 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh2P43247 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.61■■□□□ 1.05
Msh2P43247 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh2P43247 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh2P43247 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Msh2P43247 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Msh2P43247 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh2P43247 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh2P43247 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh2P43247 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Msh2P43247 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms