Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox6P40645 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Sox6P40645 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sox6P40645 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox6P40645 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Sox6P40645 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox6P40645 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox6P40645 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox6P40645 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox6P40645 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.71■□□□□ 0.75
Sox6P40645 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox6P40645 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox6P40645 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox6P40645 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox6P40645 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Sox6P40645 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox6P40645 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox6P40645 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox6P40645 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Sox6P40645 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox6P40645 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sox6P40645 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox6P40645 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox6P40645 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sox6P40645 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox6P40645 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox6P40645 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox6P40645 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sox6P40645 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox6P40645 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sox6P40645 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.66■□□□□ 0.74
Sox6P40645 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.66■□□□□ 0.74
Sox6P40645 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sox6P40645 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sox6P40645 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox6P40645 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox6P40645 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox6P40645 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox6P40645 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sox6P40645 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.66■□□□□ 0.74
Sox6P40645 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox6P40645 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox6P40645 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sox6P40645 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Sox6P40645 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox6P40645 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sox6P40645 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox6P40645 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sox6P40645 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.64■□□□□ 0.73
Sox6P40645 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.64■□□□□ 0.73
Sox6P40645 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sox6P40645 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Sox6P40645 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox6P40645 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sox6P40645 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox6P40645 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox6P40645 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sox6P40645 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Sox6P40645 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox6P40645 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox6P40645 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox6P40645 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox6P40645 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.62■□□□□ 0.73
Sox6P40645 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox6P40645 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sox6P40645 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sox6P40645 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox6P40645 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox6P40645 Gm10420-201ENSMUST00000121713 882 ntBASIC19.61■□□□□ 0.73
Sox6P40645 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sox6P40645 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.61■□□□□ 0.73
Sox6P40645 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox6P40645 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sox6P40645 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.6■□□□□ 0.73
Sox6P40645 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sox6P40645 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.6■□□□□ 0.73
Sox6P40645 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.6■□□□□ 0.73
Sox6P40645 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox6P40645 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms