Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
P01798 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Gm15546-201ENSMUST00000122095 826 ntBASIC18.01■□□□□ 0.47
P01798 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.01■□□□□ 0.47
P01798 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
P01798 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P01798 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
P01798 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
P01798 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P01798 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P01798 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18■□□□□ 0.47
P01798 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P01798 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P01798 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18■□□□□ 0.47
P01798 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
P01798 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
P01798 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
P01798 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
P01798 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P01798 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
P01798 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.98■□□□□ 0.47
P01798 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
P01798 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P01798 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
P01798 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
P01798 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.97■□□□□ 0.47
P01798 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
P01798 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.97■□□□□ 0.47
P01798 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
P01798 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
P01798 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.97■□□□□ 0.47
P01798 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P01798 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
P01798 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.96■□□□□ 0.47
P01798 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.96■□□□□ 0.47
P01798 Gm43566-201ENSMUST00000196851 808 ntBASIC17.96■□□□□ 0.47
P01798 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P01798 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
P01798 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P01798 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
P01798 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P01798 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
P01798 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P01798 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
P01798 Gm45444-201ENSMUST00000211394 898 ntBASIC17.95■□□□□ 0.46
P01798 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
P01798 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
P01798 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.94■□□□□ 0.46
P01798 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
P01798 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.94■□□□□ 0.46
P01798 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.94■□□□□ 0.46
P01798 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P01798 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.94■□□□□ 0.46
P01798 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P01798 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P01798 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
P01798 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
P01798 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01798 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
P01798 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.93■□□□□ 0.46
P01798 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
P01798 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01798 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.93■□□□□ 0.46
P01798 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.93■□□□□ 0.46
P01798 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01798 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
P01798 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.92■□□□□ 0.46
P01798 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
P01798 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01798 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01798 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
P01798 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
P01798 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
P01798 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
P01798 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
P01798 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
P01798 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
P01798 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P01798 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms