Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc3O88196 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.59■■□□□ 1.21
Ttc3O88196 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc3O88196 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc3O88196 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.59■■□□□ 1.21
Ttc3O88196 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ttc3O88196 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ttc3O88196 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ttc3O88196 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.57■■□□□ 1.2
Ttc3O88196 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.56■■□□□ 1.2
Ttc3O88196 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.56■■□□□ 1.2
Ttc3O88196 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc3O88196 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc3O88196 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc3O88196 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc3O88196 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc3O88196 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ttc3O88196 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc3O88196 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc3O88196 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Ttc3O88196 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.54■■□□□ 1.2
Ttc3O88196 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ttc3O88196 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ttc3O88196 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Ttc3O88196 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ttc3O88196 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
Ttc3O88196 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.53■■□□□ 1.2
Ttc3O88196 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ttc3O88196 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ttc3O88196 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ttc3O88196 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ttc3O88196 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.53■■□□□ 1.2
Ttc3O88196 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ttc3O88196 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ttc3O88196 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.52■■□□□ 1.2
Ttc3O88196 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Ttc3O88196 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ttc3O88196 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ttc3O88196 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ttc3O88196 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ttc3O88196 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ttc3O88196 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ttc3O88196 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ttc3O88196 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ttc3O88196 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ttc3O88196 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ttc3O88196 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ttc3O88196 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.49■■□□□ 1.19
Ttc3O88196 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ttc3O88196 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.49■■□□□ 1.19
Ttc3O88196 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ttc3O88196 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Ttc3O88196 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ttc3O88196 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ttc3O88196 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ttc3O88196 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ttc3O88196 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.48■■□□□ 1.19
Ttc3O88196 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.48■■□□□ 1.19
Ttc3O88196 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.48■■□□□ 1.19
Ttc3O88196 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ttc3O88196 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ttc3O88196 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ttc3O88196 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ttc3O88196 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.47■■□□□ 1.19
Ttc3O88196 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ttc3O88196 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ttc3O88196 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
Ttc3O88196 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ttc3O88196 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ttc3O88196 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ttc3O88196 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ttc3O88196 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Ttc3O88196 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Ttc3O88196 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Ttc3O88196 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.45■■□□□ 1.18
Ttc3O88196 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.45■■□□□ 1.18
Ttc3O88196 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ttc3O88196 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ttc3O88196 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.45■■□□□ 1.18
Ttc3O88196 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ttc3O88196 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ttc3O88196 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ttc3O88196 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ttc3O88196 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ttc3O88196 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.44■■□□□ 1.18
Ttc3O88196 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.44■■□□□ 1.18
Ttc3O88196 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ttc3O88196 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Ttc3O88196 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.44■■□□□ 1.18
Ttc3O88196 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.43■■□□□ 1.18
Ttc3O88196 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ttc3O88196 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ttc3O88196 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ttc3O88196 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms