Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm5812-201ENSMUST00000061073 957 ntBASIC26.11■■□□□ 1.77
Mmp8O70138 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Mmp8O70138 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Mmp8O70138 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Mmp8O70138 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Mmp8O70138 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Mmp8O70138 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Mmp8O70138 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Mmp8O70138 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Mmp8O70138 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.09■■□□□ 1.77
Mmp8O70138 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Mmp8O70138 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Mmp8O70138 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Mmp8O70138 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Mmp8O70138 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.08■■□□□ 1.77
Mmp8O70138 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Mmp8O70138 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Mmp8O70138 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Mmp8O70138 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Mmp8O70138 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Mmp8O70138 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Mmp8O70138 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mmp8O70138 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mmp8O70138 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mmp8O70138 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Mmp8O70138 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Mmp8O70138 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Mmp8O70138 Dmtn-209ENSMUST00000228295 2572 ntBASIC26.05■■□□□ 1.76
Mmp8O70138 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Mmp8O70138 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Mmp8O70138 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Mmp8O70138 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Mmp8O70138 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Mmp8O70138 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
Mmp8O70138 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.04■■□□□ 1.76
Mmp8O70138 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Mmp8O70138 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Mmp8O70138 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Mmp8O70138 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Mmp8O70138 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.02■■□□□ 1.76
Mmp8O70138 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.02■■□□□ 1.76
Mmp8O70138 Gm10232-201ENSMUST00000089221 720 ntBASIC26.02■■□□□ 1.76
Mmp8O70138 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Mmp8O70138 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Mmp8O70138 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Mmp8O70138 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Mmp8O70138 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Mmp8O70138 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Mmp8O70138 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Mmp8O70138 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.01■■□□□ 1.75
Mmp8O70138 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
Mmp8O70138 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26■■□□□ 1.75
Mmp8O70138 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
Mmp8O70138 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Mmp8O70138 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26■■□□□ 1.75
Mmp8O70138 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
Mmp8O70138 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
Mmp8O70138 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Mmp8O70138 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Mmp8O70138 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Mmp8O70138 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Mmp8O70138 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Mmp8O70138 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Mmp8O70138 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Mmp8O70138 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.97■■□□□ 1.75
Mmp8O70138 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Mmp8O70138 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Mmp8O70138 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Mmp8O70138 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Mmp8O70138 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.96■■□□□ 1.75
Mmp8O70138 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.96■■□□□ 1.75
Mmp8O70138 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.96■■□□□ 1.75
Mmp8O70138 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Mmp8O70138 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Mmp8O70138 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.75
Mmp8O70138 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Mmp8O70138 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.95■■□□□ 1.74
Mmp8O70138 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Mmp8O70138 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Mmp8O70138 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Mmp8O70138 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Mmp8O70138 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.95■■□□□ 1.74
Mmp8O70138 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Mmp8O70138 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Mmp8O70138 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Mmp8O70138 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Mmp8O70138 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms