Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SncaO55042 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SncaO55042 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SncaO55042 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SncaO55042 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SncaO55042 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Gm11687-201ENSMUST00000118911 886 ntBASIC17.45■□□□□ 0.38
SncaO55042 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SncaO55042 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SncaO55042 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SncaO55042 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SncaO55042 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SncaO55042 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SncaO55042 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SncaO55042 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SncaO55042 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SncaO55042 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.43■□□□□ 0.38
SncaO55042 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SncaO55042 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SncaO55042 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SncaO55042 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SncaO55042 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SncaO55042 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SncaO55042 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SncaO55042 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SncaO55042 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SncaO55042 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SncaO55042 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.41■□□□□ 0.38
SncaO55042 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.41■□□□□ 0.38
SncaO55042 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.41■□□□□ 0.38
SncaO55042 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SncaO55042 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SncaO55042 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SncaO55042 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SncaO55042 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SncaO55042 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SncaO55042 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SncaO55042 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SncaO55042 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SncaO55042 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SncaO55042 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SncaO55042 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SncaO55042 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SncaO55042 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.39■□□□□ 0.37
SncaO55042 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.39■□□□□ 0.37
SncaO55042 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SncaO55042 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SncaO55042 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.38■□□□□ 0.37
SncaO55042 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SncaO55042 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SncaO55042 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SncaO55042 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SncaO55042 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SncaO55042 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SncaO55042 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SncaO55042 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SncaO55042 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SncaO55042 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SncaO55042 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.37■□□□□ 0.37
SncaO55042 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
SncaO55042 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.37■□□□□ 0.37
SncaO55042 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.37■□□□□ 0.37
SncaO55042 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.37■□□□□ 0.37
SncaO55042 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SncaO55042 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SncaO55042 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SncaO55042 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.36■□□□□ 0.37
SncaO55042 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SncaO55042 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SncaO55042 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SncaO55042 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SncaO55042 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SncaO55042 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms