Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Efnb3O35393 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.66■□□□□ 0.26
Efnb3O35393 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.66■□□□□ 0.26
Efnb3O35393 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Efnb3O35393 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Efnb3O35393 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.65■□□□□ 0.26
Efnb3O35393 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Efnb3O35393 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Efnb3O35393 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Efnb3O35393 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
Efnb3O35393 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Efnb3O35393 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Efnb3O35393 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Efnb3O35393 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Efnb3O35393 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Efnb3O35393 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Efnb3O35393 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Efnb3O35393 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.62■□□□□ 0.25
Efnb3O35393 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Efnb3O35393 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Efnb3O35393 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Efnb3O35393 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Efnb3O35393 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.62■□□□□ 0.25
Efnb3O35393 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.62■□□□□ 0.25
Efnb3O35393 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Efnb3O35393 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.62■□□□□ 0.25
Efnb3O35393 Gm6311-201ENSMUST00000073790 878 ntBASIC16.62■□□□□ 0.25
Efnb3O35393 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Efnb3O35393 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Efnb3O35393 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.62■□□□□ 0.25
Efnb3O35393 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.61■□□□□ 0.25
Efnb3O35393 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Efnb3O35393 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Efnb3O35393 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Efnb3O35393 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Efnb3O35393 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Efnb3O35393 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Efnb3O35393 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Efnb3O35393 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Efnb3O35393 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Efnb3O35393 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Efnb3O35393 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Efnb3O35393 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Efnb3O35393 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Efnb3O35393 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Efnb3O35393 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Efnb3O35393 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Efnb3O35393 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Efnb3O35393 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Efnb3O35393 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Efnb3O35393 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Efnb3O35393 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.58■□□□□ 0.24
Efnb3O35393 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.58■□□□□ 0.24
Efnb3O35393 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Efnb3O35393 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Efnb3O35393 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Efnb3O35393 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Efnb3O35393 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Efnb3O35393 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Efnb3O35393 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Efnb3O35393 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Efnb3O35393 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Efnb3O35393 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Efnb3O35393 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Efnb3O35393 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Efnb3O35393 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Efnb3O35393 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Efnb3O35393 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Efnb3O35393 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Efnb3O35393 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Efnb3O35393 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.56■□□□□ 0.24
Efnb3O35393 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Efnb3O35393 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.56■□□□□ 0.24
Efnb3O35393 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Efnb3O35393 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Efnb3O35393 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Efnb3O35393 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Efnb3O35393 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Efnb3O35393 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Efnb3O35393 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Efnb3O35393 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms