Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9d-4A0A0G2JG37 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9d-4A0A0G2JG37 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9d-4A0A0G2JG37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav9d-4A0A0G2JG37 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9d-4A0A0G2JG37 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9d-4A0A0G2JG37 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9d-4A0A0G2JG37 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Trav9d-4A0A0G2JG37 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav9d-4A0A0G2JG37 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Gm8503-201ENSMUST00000118131 455 ntBASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav9d-4A0A0G2JG37 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9d-4A0A0G2JG37 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 362.7 ms