Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9n-2A0A0G2JDP3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav9n-2A0A0G2JDP3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.31■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-2A0A0G2JDP3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms