Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-42A0A0A6YY38 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-42A0A0A6YY38 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-42A0A0A6YY38 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.69■□□□□ 0.74
Ighv1-42A0A0A6YY38 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.69■□□□□ 0.74
Ighv1-42A0A0A6YY38 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.69■□□□□ 0.74
Ighv1-42A0A0A6YY38 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-42A0A0A6YY38 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-42A0A0A6YY38 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.68■□□□□ 0.74
Ighv1-42A0A0A6YY38 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-42A0A0A6YY38 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.68■□□□□ 0.74
Ighv1-42A0A0A6YY38 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-42A0A0A6YY38 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-42A0A0A6YY38 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-42A0A0A6YY38 Gm21956-201ENSMUST00000179946 522 ntBASIC19.67■□□□□ 0.74
Ighv1-42A0A0A6YY38 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-42A0A0A6YY38 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-42A0A0A6YY38 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-42A0A0A6YY38 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-42A0A0A6YY38 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ighv1-42A0A0A6YY38 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-42A0A0A6YY38 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-42A0A0A6YY38 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-42A0A0A6YY38 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-42A0A0A6YY38 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.64■□□□□ 0.73
Ighv1-42A0A0A6YY38 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-42A0A0A6YY38 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-42A0A0A6YY38 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-42A0A0A6YY38 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-42A0A0A6YY38 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.61■□□□□ 0.73
Ighv1-42A0A0A6YY38 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-42A0A0A6YY38 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.61■□□□□ 0.73
Ighv1-42A0A0A6YY38 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-42A0A0A6YY38 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-42A0A0A6YY38 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.59■□□□□ 0.73
Ighv1-42A0A0A6YY38 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms