Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Ighv1-36A0A0A6YXT2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Gm7332-201ENSMUST00000118351 454 ntBASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.09■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ighv1-36A0A0A6YXT2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.08■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.08■□□□□ 0.33
Ighv1-36A0A0A6YXT2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-36A0A0A6YXT2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-36A0A0A6YXT2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-36A0A0A6YXT2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-36A0A0A6YXT2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-36A0A0A6YXT2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms