Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-4A0A075B6B4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-4A0A075B6B4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-4A0A075B6B4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-4A0A075B6B4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Gm43566-201ENSMUST00000196851 808 ntBASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-4A0A075B6B4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-4A0A075B6B4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-4A0A075B6B4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav6-4A0A075B6B4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-4A0A075B6B4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-4A0A075B6B4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6-4A0A075B6B4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav6-4A0A075B6B4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav6-4A0A075B6B4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6-4A0A075B6B4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Gm13238-201ENSMUST00000117655 780 ntBASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.25■□□□□ 0.19
Trav6-4A0A075B6B4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6-4A0A075B6B4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6-4A0A075B6B4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav6-4A0A075B6B4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav6-4A0A075B6B4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav6-4A0A075B6B4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav6-4A0A075B6B4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav6-4A0A075B6B4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-4A0A075B6B4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6-4A0A075B6B4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6-4A0A075B6B4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-4A0A075B6B4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms