Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav17A0A075B655 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav17A0A075B655 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Trav17A0A075B655 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav17A0A075B655 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav17A0A075B655 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav17A0A075B655 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav17A0A075B655 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav17A0A075B655 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav17A0A075B655 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.75■□□□□ 0.27
Trav17A0A075B655 Gm44428-201ENSMUST00000204474 874 ntBASIC16.75■□□□□ 0.27
Trav17A0A075B655 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav17A0A075B655 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.74■□□□□ 0.27
Trav17A0A075B655 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav17A0A075B655 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Trav17A0A075B655 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Notumos-201ENSMUST00000151998 2659 ntBASIC16.72■□□□□ 0.27
Trav17A0A075B655 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav17A0A075B655 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav17A0A075B655 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav17A0A075B655 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav17A0A075B655 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.69■□□□□ 0.26
Trav17A0A075B655 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.69■□□□□ 0.26
Trav17A0A075B655 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav17A0A075B655 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.69■□□□□ 0.26
Trav17A0A075B655 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav17A0A075B655 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav17A0A075B655 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms