Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13-2A0A075B649 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13-2A0A075B649 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav13-2A0A075B649 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13-2A0A075B649 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
Trav13-2A0A075B649 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.08□□□□□ -0.15
Trav13-2A0A075B649 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-2A0A075B649 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-2A0A075B649 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-2A0A075B649 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-2A0A075B649 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13-2A0A075B649 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13-2A0A075B649 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13-2A0A075B649 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Gm7432-201ENSMUST00000210343 879 ntBASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13-2A0A075B649 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms