Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav7n-4A0A075B620 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7n-4A0A075B620 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7n-4A0A075B620 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7n-4A0A075B620 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7n-4A0A075B620 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav7n-4A0A075B620 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7n-4A0A075B620 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav7n-4A0A075B620 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7n-4A0A075B620 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.98■□□□□ 0.15
Trav7n-4A0A075B620 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7n-4A0A075B620 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7n-4A0A075B620 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7n-4A0A075B620 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav7n-4A0A075B620 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav7n-4A0A075B620 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7n-4A0A075B620 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav7n-4A0A075B620 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Trav7n-4A0A075B620 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7n-4A0A075B620 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Gm45855-201ENSMUST00000212546 880 ntBASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav7n-4A0A075B620 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Nkain2-201ENSMUST00000092602 558 ntBASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav7n-4A0A075B620 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 Golph3-202ENSMUST00000226517 2359 ntBASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav7n-4A0A075B620 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7n-4A0A075B620 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav7n-4A0A075B620 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trav7n-4A0A075B620 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav7n-4A0A075B620 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms