Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Vps35Q9EQH3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.57■■■□□ 2
Vps35Q9EQH3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Vps35Q9EQH3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.55■■■□□ 2
Vps35Q9EQH3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
Vps35Q9EQH3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Vps35Q9EQH3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Vps35Q9EQH3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Vps35Q9EQH3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Vps35Q9EQH3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Vps35Q9EQH3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Vps35Q9EQH3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.4■■□□□ 1.98
Vps35Q9EQH3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Vps35Q9EQH3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Vps35Q9EQH3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.38■■□□□ 1.97
Vps35Q9EQH3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.37■■□□□ 1.97
Vps35Q9EQH3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Vps35Q9EQH3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Vps35Q9EQH3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.31■■□□□ 1.96
Vps35Q9EQH3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Vps35Q9EQH3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Vps35Q9EQH3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Vps35Q9EQH3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Vps35Q9EQH3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Vps35Q9EQH3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Vps35Q9EQH3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.13■■□□□ 1.93
Vps35Q9EQH3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Vps35Q9EQH3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.1■■□□□ 1.93
Vps35Q9EQH3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Vps35Q9EQH3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Vps35Q9EQH3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Vps35Q9EQH3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Vps35Q9EQH3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27■■□□□ 1.91
Vps35Q9EQH3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Vps35Q9EQH3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
Vps35Q9EQH3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Vps35Q9EQH3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vps35Q9EQH3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vps35Q9EQH3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vps35Q9EQH3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vps35Q9EQH3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Vps35Q9EQH3 Gm26115-201ENSMUST00000175605 87 ntBASIC26.91■■□□□ 1.9
Vps35Q9EQH3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.89■■□□□ 1.9
Vps35Q9EQH3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.85■■□□□ 1.89
Vps35Q9EQH3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Vps35Q9EQH3 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.84■■□□□ 1.89
Vps35Q9EQH3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Vps35Q9EQH3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.82■■□□□ 1.88
Vps35Q9EQH3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vps35Q9EQH3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Vps35Q9EQH3 Gm8109-201ENSMUST00000194076 746 ntBASIC26.78■■□□□ 1.88
Vps35Q9EQH3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Vps35Q9EQH3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Vps35Q9EQH3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Vps35Q9EQH3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Vps35Q9EQH3 Gm27322-201ENSMUST00000184007 104 ntBASIC26.68■■□□□ 1.86
Vps35Q9EQH3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Vps35Q9EQH3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Vps35Q9EQH3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
Vps35Q9EQH3 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.64■■□□□ 1.86
Vps35Q9EQH3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Vps35Q9EQH3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vps35Q9EQH3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Vps35Q9EQH3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.59■■□□□ 1.85
Vps35Q9EQH3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Vps35Q9EQH3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vps35Q9EQH3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Vps35Q9EQH3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vps35Q9EQH3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Vps35Q9EQH3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Vps35Q9EQH3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Vps35Q9EQH3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Vps35Q9EQH3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Vps35Q9EQH3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Vps35Q9EQH3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.44■■□□□ 1.82
Vps35Q9EQH3 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.4■■□□□ 1.82
Vps35Q9EQH3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.38■■□□□ 1.81
Vps35Q9EQH3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Vps35Q9EQH3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Vps35Q9EQH3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Vps35Q9EQH3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Vps35Q9EQH3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Vps35Q9EQH3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Vps35Q9EQH3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Vps35Q9EQH3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vps35Q9EQH3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vps35Q9EQH3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Vps35Q9EQH3 Mipep-204ENSMUST00000225043 1548 ntBASIC26.24■■□□□ 1.79
Vps35Q9EQH3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Vps35Q9EQH3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Vps35Q9EQH3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Vps35Q9EQH3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Vps35Q9EQH3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Vps35Q9EQH3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Vps35Q9EQH3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Vps35Q9EQH3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Vps35Q9EQH3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Vps35Q9EQH3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Vps35Q9EQH3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.11■■□□□ 1.77
Vps35Q9EQH3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms