Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Lysmd2Q9D7V2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lysmd2Q9D7V2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Lysmd2Q9D7V2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Lysmd2Q9D7V2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.64■■□□□ 1.21
Lysmd2Q9D7V2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Lysmd2Q9D7V2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lysmd2Q9D7V2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lysmd2Q9D7V2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lysmd2Q9D7V2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lysmd2Q9D7V2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lysmd2Q9D7V2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lysmd2Q9D7V2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Lysmd2Q9D7V2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lysmd2Q9D7V2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lysmd2Q9D7V2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lysmd2Q9D7V2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lysmd2Q9D7V2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.37■■□□□ 1.17
Lysmd2Q9D7V2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.37■■□□□ 1.17
Lysmd2Q9D7V2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lysmd2Q9D7V2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Lysmd2Q9D7V2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.29■■□□□ 1.16
Lysmd2Q9D7V2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd2Q9D7V2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.27■■□□□ 1.16
Lysmd2Q9D7V2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lysmd2Q9D7V2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lysmd2Q9D7V2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lysmd2Q9D7V2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Lysmd2Q9D7V2 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.2■■□□□ 1.14
Lysmd2Q9D7V2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lysmd2Q9D7V2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Lysmd2Q9D7V2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lysmd2Q9D7V2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Lysmd2Q9D7V2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lysmd2Q9D7V2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lysmd2Q9D7V2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lysmd2Q9D7V2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lysmd2Q9D7V2 Gm27325-201ENSMUST00000175467 74 ntBASIC22.04■■□□□ 1.12
Lysmd2Q9D7V2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lysmd2Q9D7V2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lysmd2Q9D7V2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lysmd2Q9D7V2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lysmd2Q9D7V2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd2Q9D7V2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd2Q9D7V2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lysmd2Q9D7V2 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.98■■□□□ 1.11
Lysmd2Q9D7V2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lysmd2Q9D7V2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lysmd2Q9D7V2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lysmd2Q9D7V2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lysmd2Q9D7V2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lysmd2Q9D7V2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lysmd2Q9D7V2 Zxda-201ENSMUST00000117281 2621 ntBASIC21.89■■□□□ 1.09
Lysmd2Q9D7V2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lysmd2Q9D7V2 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.88■■□□□ 1.09
Lysmd2Q9D7V2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lysmd2Q9D7V2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lysmd2Q9D7V2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Lysmd2Q9D7V2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.85■■□□□ 1.09
Lysmd2Q9D7V2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Lysmd2Q9D7V2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lysmd2Q9D7V2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lysmd2Q9D7V2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lysmd2Q9D7V2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.79■■□□□ 1.08
Lysmd2Q9D7V2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.79■■□□□ 1.08
Lysmd2Q9D7V2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lysmd2Q9D7V2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd2Q9D7V2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd2Q9D7V2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd2Q9D7V2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lysmd2Q9D7V2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd2Q9D7V2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd2Q9D7V2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd2Q9D7V2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd2Q9D7V2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd2Q9D7V2 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.69■■□□□ 1.06
Lysmd2Q9D7V2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd2Q9D7V2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd2Q9D7V2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.67■■□□□ 1.06
Lysmd2Q9D7V2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd2Q9D7V2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.66■■□□□ 1.06
Lysmd2Q9D7V2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd2Q9D7V2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd2Q9D7V2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd2Q9D7V2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd2Q9D7V2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd2Q9D7V2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd2Q9D7V2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd2Q9D7V2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd2Q9D7V2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.58■■□□□ 1.05
Lysmd2Q9D7V2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.56■■□□□ 1.04
Lysmd2Q9D7V2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd2Q9D7V2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd2Q9D7V2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd2Q9D7V2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd2Q9D7V2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd2Q9D7V2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd2Q9D7V2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.53■■□□□ 1.04
Lysmd2Q9D7V2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd2Q9D7V2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms